rs30971868 SNP Detail

Summary

• ID
  rs30971868
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:63142875 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTCCTTACT TGAATTGCCT
  CTAGGACTGG CTGGCAATCC TCAGTGTTCT GTGGCTGGTA GATCCACCAC TCCTATGCTT
  ACCTGTATCC TTATGCCATT TTCCCCTGTG TATTTATCTT ACAGGATGCC GGTCATTGGC
  GTTAGTCACC ACTAATCCAT TGTGGTCTCA TCCTAACCTG TTACATCTTC AAAGCTTAAC
  Y
  GGTCACACCT TAACTTACTA TTCTTAAAAG AGGTTGTACT TAGAGTGTAC TGACTGGTTT
  TGTGTGTCAG CTTGACACAG GCTGGAGTTA TCACAGGGAA AGGAGCCTCC CTTGAGAAAA
  ATGCCTTCAT GAGATCCAGC TGTAAGGCAT TTTCTCAATT AGTGATCAAG GGGGGAAGGC
  CTAGCCCATT GTGGGTGGTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49190041	NES12492022	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	T	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30971868					SNP	C	C	C	C	C	C	C	C	C	C	T	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49190041	NES12492022	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:63142875 () rs orientation: forward

Symbol	Name	Function Class
Tssr126031	transcription start site region 126031	1431 bp upstream
Wdfy2	WD repeat and FYVE domain containing 2	within coordinates