rs30971873 SNP Detail

Summary

• ID
  rs30971873
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:63142733 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCAGTACCT AGCCTGCTAC
  TTTCCTGGAG TTGCCACAAC AGATGGCTTA AAACAACAGA ATTCATTTTC TCAGTTTCAG
  AAACTTGATA CAGAAATCAA GATGTTGGCA GGGCTGTGCT CATTCTGAAG CTGGCAAAGG
  AGACTCCTTA CTTGAATTGC CTCTAGGACT GGCTGGCAAT CCTCAGTGTT CTGTGGCTGG
  Y
  AGATCCACCA CTCCTATGCT TACCTGTATC CTTATGCCAT TTTCCCCTGT GTATTTATCT
  TACAGGATGC CGGTCATTGG CGTTAGTCAC CACTAATCCA TTGTGGTCTC ATCCTAACCT
  GTTACATCTT CAAAGCTTAA CCGGTCACAC CTTAACTTAC TATTCTTAAA AGAGGTTGTA
  CTTAGAGTGT ACTGACTGGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49190049	NES12492016	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30971873					SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49190049	NES12492016	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:63142733 () rs orientation: forward

Symbol	Name	Function Class
Tssr126031	transcription start site region 126031	1573 bp upstream
Wdfy2	WD repeat and FYVE domain containing 2	within coordinates