rs30971874 SNP Detail

Summary

• ID
  rs30971874
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:140587848 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GGCTTCAGAG GTGTGGCCTG TGGGAGTCAG AGGTGTGGCC TGTGGGAGTC AGAGGTGTGG
  CCTGTGGGCT TCAGAGGTGT GGCCTGTGGG CTTCAGAGGT GTGGCCTGTG GGCTTCAGAG
  GTGTGGCCTG TGGGAGCAAT GGATCACTGA GACCTTTACC TACTTGGCTG ATTAATCCAT
  CGATGGCTTA ATGGGCTGTT GGGAGGTGGT GGAAACTTCA GGAGCTGCCA CCGGAGGAAG
  TAGGCCACTG GGAGGGTGCC TTTGAATGGG GACACTTGTT CTGGTCCCCT TTGCTTTCCA
  K
  CCAGCTTGGA GAGAACAGGT AGCTTGGTCG CAGGCTCCCT GCTTATCAAG GTGACCCGGA
  GGTCAAACCC TCAGAGCTCT AAGCCAAAAT AAACCTGTCA TTATGTAAGT TGCTTTTCTC
  AGTGATGGTT TATCACAGCA ATGGAAAGCT GAGTGAACCA AGCCCACAAA GGAGGGATTC
  TACTCACCCT CAGACCGGAG GGGGCTCCCT CAAGACAAAC TGGTCTCTCC CAGAGGTAGC
  TGGGAGGAAT ATAGGGAGCC CTGGGTCTCA GTTGTGAGAC CCCCCCCCAC ACACACACAG
                                                                   
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46465028	mCV22971570	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	G	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30971874					SNP	G	G	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:140587848 () rs orientation: forward

Symbol	Name	Function Class
Rr377299	regulatory region 377299	1854 bp upstream