rs30972726 SNP Detail

Summary

• ID
  rs30972726
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:117536566 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTGTAACTT GTTACTTCTG
  ATCAACATTG AACCCTAACA GGAAGCAGTT TCTACAGGAA CGTTTAGAAA AGTCATTTTA
  AGTTTAAGTG TCAGTACTTC AGTGAGATCC ACAGAGAGCT CTGTGGCTTG CCCTAGCTCA
  GTGAGCTGCT ATCCTAAGTG TTAATGAAAG AAAACTCCCT TGGGCCTAGT TAAGAGGCTT
  Y
  AGAGGAGGTT CTGACAATAG GATTGTGTTC TGTGAAAGAG AAGGTCTTAT TTTGTCTCTT
  GTCATTCCCC AGGGACTGGC AGCTTGTCTA ACACCCTTAT CTCTATAGCA CTGAGGAGTC
  CCATCACTTT CCCTGCCTCC CTTACCTGTC TTTAGAAAGA GGCCGTGCTG GGGTGGTGCT
  ACTTAGCTGG ATTGTGTGAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss46464941	mCV24240486	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs30972726					SNP	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:117536566 () rs orientation: forward

Symbol	Name	Function Class
Gm54711	predicted gene, 54711	1396 bp upstream
Rapgef5	Rap guanine nucleotide exchange factor (GEF) 5	within coordinates