rs30981115 SNP Detail

Summary

• ID
  rs30981115
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:107910586 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACCTGCCAG TTGTTTTCTT
  TCCCCTTGGA GCCAAGATGG TTGACCAGAT ATCTATCCTC CTTCAGTGTA CGACCAGAGT
  CTTTCATCCG CCAGAGCCTG ACGCCCAAAG CACCTGCTCA CTCTGTGTCC TTGCCAGGGT
  TTCTCTCATT GGTTCCCACT CCTTCCTTTC ATTTCAAAAG TTGATGCCAA TGACTTAGAG
  Y
  TCCTATGTTG TAGTGACATG GCCTTTGGGG ACAGTACATG ATTTCTCATA ATTTGAATTC
  ATAGTAGATA TAGTTAAGGG AACAGCAGTC AGGTTATGAA TCTTTTCCCA TTTTTCTTTT
  TAAGTAAATT TATTTTTTTA ATTCTGATTT AATTTTGTCA TTCATCATAA GGGATTTAAT
  TCATGAAGTT GTGTGTATCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss47504557	NES11220194	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	C	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs30981115					SNP	T	T	T	T	T	T	T	T	T	T	C	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47504557	NES11220194	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:107910586 () rs orientation: forward

Symbol	Name	Function Class
Cyb5b	cytochrome b5 type B	within coordinates
Rr669364	regulatory region 669364	1097 bp distal
Tssr79292	transcription start site region 79292	851 bp downstream