rs30982618 SNP Detail

Summary

• ID
  rs30982618
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:147181864 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATAT ATTGAATAAA TATATTTACC
  Y
  AATTTATTTG AAAAATAGAT ATTTC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	DBA/2J	FVB/NJ	LG/J	MSM/Ms	PWD/PhJ	SM/J
ss45022682	mCV24651581	ABI	CRAMUS_MOUSE	f	SNP	T	T			C	T
ss49690465	NES13079683	PERLEGEN	MM_PANEL2	f	SNP			C	T			T			T
ss145669223	ENSMUSSNP3636268	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T				T			T
ss320022105	CHEV_1_149153256	CHEVERUD	SCREENING_POP	f	SNP								T			T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	DBA/2J	FVB/NJ	LG/J	MSM/Ms	PWD/PhJ	SM/J
rs30982618					SNP	T	T	C	T	C	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49690465	NES13079683	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:147181864 () rs orientation: forward

Symbol	Name	Function Class
Rr420066	regulatory region 420066	485 bp distal