rs30983196 SNP Detail

Summary

• ID
  rs30983196
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:146937112 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGTTGAAAT TTCTATGTTG
  AATTTATATA ACAAAACAAA ATTATGAATT TTAAATTGTT CGTGATTAAT TTGATTCTTG
  GTACAGAGAT CCAATGAGTA TATACATCTA TATTCTATCT AATTTCATTA TACTAATGAT
  AATTGATATC CTAGAAAACT TTTAACATAG ACATAAATTA TTTGACTATA ATTACTATTT
  R
  AAATAATCTC TTCTTCCTAA AAATATTGGC ACTCCAAATT TTATTACTCT CTTTCTTTCT
  TTACTTCTTT CTTTGTTTTT TTTGTTTCTT TCATGTGTTT GTATGTATGT GTGTGCATTA
  TATGAGTACA CTGATATTAA TGTATAAATG TGTTTGTTCC ATACATATTT ACCTTTGCAA
  ATTTAAAGGC CAGAGCTTGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	PWD/PhJ
ss49691542	NES12958870	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	G	A	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	PWD/PhJ
rs30983196					SNP	A	A	A	G	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49691542	NES12958870	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:146937112 () rs orientation: forward

Symbol	Name	Function Class
Rr372196	regulatory region 372196	298 bp upstream