rs30985252 SNP Detail

Summary

• ID
  rs30985252
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:129051755 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTGTATGAGT GTTTGTGTGT GTCTATGGAC CACTTGTGTG
  TCTGATACCT GCAGAGGTCG GAGGAGAGCG CCAGATTCCC TGTAACTGGA GTTGTGAGAC
  R
  CCACGTGAGT GCTGGGGACT GAATTCAGGT CCTTTGCAAG ATGGTTCTTA ACCACTGACC
  TATGCTAGGT GTTTTCTGTG CCAGTGCTTA ATATCTATA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45485906	mCV23445914	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss320961809	CHEV_3_128961024	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30985252					SNP	G	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:129051755 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13813	CpG island 13813	1409 bp distal
Gm65501	predicted gene, 65501	within coordinates
Rr584978	regulatory region 584978	959 bp distal
Rr584979	regulatory region 584979	1048 bp distal
Rr584980	regulatory region 584980	560 bp proximal
Rr584981	regulatory region 584981	620 bp proximal