rs30987031 SNP Detail

Summary

• ID
  rs30987031
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:147061799 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATATACTTTC AATTGTACCA
  CCACCATGTA GACTTACAAG GCATCATTCA TCCAAAATTT AGCAACTGGC TATGTTACCT
  TTAATGTACT GTTAATGTTT TCTTTGATTA TTAATATTTA AAAATAATTT AGTGGTTTCA
  CTAATAATTT TGTTATAGTG ATTTTGATTT TTATCCTCCT ATTAATTCAG TGGTTCACTC
  R
  AATGGACAGC TCTGTTCTTT ATTATTAACT TTCTTCTTAC CTATAAATGT GAGTTTAAAT
  AATCTAACCT TCCTATCTTG TCTTTTCAGT TCAGCCCTTC TCCCTTTAAT TCCTTTCACT
  CACTTGCAAC TACTTATCAA TCTTGTCAAT AGTTACCCCA AATAATTATG TAAATTAAGT
  ACTTTTCTTG AAGTTTTCTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49691000	NES13080218	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30987031					SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49691000	NES13080218	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:147061799 () rs orientation: forward

Symbol	Name	Function Class
Rr420063	regulatory region 420063	1275 bp proximal
Rr420064	regulatory region 420064	1657 bp proximal