rs30993435 SNP Detail

Summary

• ID
  rs30993435
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:108408771 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGGCAACTCT CTGCCCTGGC
  CAACCATGCA CTGGCACTGG TGGGCAATGG CTGACCTGTT TTTTACCTCG TGGAGACTCT
  CTGGCCCGGA GCTCCCAAAA CGTCTCCACC CAGCTCGCTA AGTTCCCACT GGCAGGTCAC
  TACGATGCCA ACCTCGTCCT TCACATCCCC CACGGCCTTT GTGGTGCACA TCTGGCAAAC
  Y
  CACTCTTAGC CTCCGTACCT TTCTCTCTTG AACCGGGACG AGCATTGAAA CCGGGAGGTG
  CTTGTAGCTA TGTCTTGTCC TCACACTTCG CTGTCTAAAA AGGACCTAAC CTTTCCTGCT
  TCCTCTCTTC CTCTGTCCAA CCTGGAAGTC CCTCCCACTT GCCCAGTGAT TGGCTCCTTT
  ATTCAGTAGG GGATTGGTTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47505406	NES11215020	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	C	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30993435					SNP	T	T	T	T	T	T	T	T	T	T	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47505406	NES11215020	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:108408771 () rs orientation: forward

Symbol	Name	Function Class
Gm64294	predicted gene, 64294	within coordinates
Tssr82809	transcription start site region 82809	89 bp downstream