rs30993441 SNP Detail

Summary

• ID
  rs30993441
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:108409205 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTGACTAGA TCGGTTGGTC
  AGTGAGATAC ATGGATCCTC TTGTGTCTGT CCCCACCGAT GCTGGCATTA GAGGTTCATG
  TCAACTGTGC CTGTGCACTG TGCACAGGTC CCTAGCATTT TTACATGAGC GCTAGGGATC
  AGAACACAAG TCCTTACGCT TGCAGAGCAG GTGTCTCATG CACTGAGATG TCTCCCTAGC
  Y
  CAACTTTTGT TTATTGTTAC AGTGGGGTAA ATTACAAATT GTCTTTGTCC CACAGGAATC
  CAGCATTTTG GTTGCTGTGT TTGTCTAGCA AAAGATGAAC AAATCTTACT TTCTTTCCTG
  AAATCGAAGA CTGATAAAAC AATAATAAAT TTTAAAACGT TTTTAAAAAG GCTCCAATAG
  CTTCTTTTGA TTAAAGGCAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47505412	NES11215026	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	T	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30993441					SNP	C	C	C	C	C	C	C	C	C	C	T	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47505412	NES11215026	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:108409205 () rs orientation: forward

Symbol	Name	Function Class
Gm64294	predicted gene, 64294	296 bp upstream
Tssr82809	transcription start site region 82809	322 bp upstream