rs30994254 SNP Detail

Summary

• ID
  rs30994254
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:108409291 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGCCTGTGC ACTGTGCACA
  GGTCCCTAGC ATTTTTACAT GAGCGCTAGG GATCAGAACA CAAGTCCTTA CGCTTGCAGA
  GCAGGTGTCT CATGCACTGA GATGTCTCCC TAGCCCAACT TTTGTTTATT GTTACAGTGG
  GGTAAATTAC AAATTGTCTT TGTCCCACAG GAATCCAGCA TTTTGGTTGC TGTGTTTGTC
  Y
  AGCAAAAGAT GAACAAATCT TACTTTCTTT CCTGAAATCG AAGACTGATA AAACAATAAT
  AAATTTTAAA ACGTTTTTAA AAAGGCTCCA ATAGCTTCTT TTGATTAAAG GCATAGAATC
  TTAGTTAGAT AAAATATCTC CATGACTGTG ACATGAAAGG CAGACCTGCG TAATTAGTGG
  GTTTGTTAGT TGTCTTTGAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47505415	NES11215028	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30994254					SNP	T	T	T	T	T	T	T	T	T	T	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47505415	NES11215028	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:108409291 () rs orientation: forward

Symbol	Name	Function Class
Gm64294	predicted gene, 64294	382 bp upstream
Tssr82809	transcription start site region 82809	408 bp upstream