rs30995986 SNP Detail

Summary

• ID
  rs30995986
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:47445376 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTATT TGGGGGAGAG ATTCCTACAA
  R
  TGGATTTCTG GGCCAAAGGT AAAAT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45985864	mCV25306654	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
ss321792071	CHEV_6_47418441	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs30995986					SNP	A	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:47445376 () rs orientation: forward

Symbol	Name	Function Class
Cul1	cullin 1	within coordinates
D6Dcr7	DNA Segment, Chr 6, Derry C. Roopenian 7	811 bp proximal
D6Mit352	DNA segment, Chr 6, Massachusetts Institute of Technology 352	814 bp proximal
Tssr56089	transcription start site region 56089	310 bp downstream
Tssr56090	transcription start site region 56090	87 bp downstream