rs30998234 SNP Detail

Summary

• ID
  rs30998234
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:129308047 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAGCAACAGC ACCTCCTAGC AGGGTCCAAA GGGTCAGCAC
  TTTCTTCGCA TCTGTACATA AAGCAAGCAG ACAGGTCACT ACCAGAGAAA AATAACAAGC
  R
  AACAAAACCT CCATTAAAAA AGCCATAATC TCTGTATCCT ATACACAACT CAGCCATTGA
  TCTATTAGGA AAAGGGAAAA GGCACTCAGG TGTGACTTT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45986785	mCV25321591	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs30998234					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:129308047 () rs orientation: forward

Symbol	Name	Function Class
Clec2m	C-type lectin domain family 2, member m	within coordinates
Tssr63594	transcription start site region 63594	654 bp downstream
Tssr63595	transcription start site region 63595	702 bp downstream
Tssr63596	transcription start site region 63596	721 bp downstream