rs30999846 SNP Detail

Summary

• ID
  rs30999846
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:47888752 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTAT GCCTACTATG CTTTTTTTTT
  W
  ATGGCCAAAT TTTTAATTAA AAAGA                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39244065	mCV23875072	ABI	CRAMUS_MOUSE	f	SNP	T	T	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30999846					SNP	T	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:47888752 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6388	CpG island 6388	1136 bp distal
Ktn1	kinectin 1	within coordinates
Rr297095	regulatory region 297095	551 bp distal
Tssr125324	transcription start site region 125324	1906 bp downstream
Tssr125325	transcription start site region 125325	906 bp downstream