rs31002511 SNP Detail

Summary

• ID
  rs31002511
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:87153091 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATCTG CAGAGGATCA GCTTTCCGCT
  R
  ATGTTATTGG TGGTGGTATT GTAGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45488356	mCV24901290	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A
ss135456643	ENSMUSSNP1471095	ENSEMBL	ENSEMBL_Sanger	f	SNP			G	A
ss320831786	CHEV_3_87049706	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs31002511					SNP	A	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:87153091 () rs orientation: forward

Symbol	Name	Function Class
Rr579462	regulatory region 579462	1704 bp distal
Rr579463	regulatory region 579463	1940 bp distal
Rr579464	regulatory region 579464	960 bp distal
Rr579465	regulatory region 579465	1614 bp proximal