rs31004374 SNP Detail

Summary

• ID
  rs31004374
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:115834966 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAGCAACTG TGCTGAATCC
  ATCAAGACAG AGAACAAGAT GTGCTTCACT TCACTGTGTC TAATGTCTCG AAGATTGTCA
  GAAAATGCAG TCACAGCTTT ACAAACAGTG TTTGCCCAAC CTTGGCAAAC TCAGTCCTTT
  AATGGAGTTT CCTCTCTTTT CTATGTAACC GCCTGATGAG CCTCAGGGAA TTCACATGCC
  R
  TAAACTTTAG CCTGAGCAAA GCAACTCGCA TGCTGTTTGG CAACTTCCAG GTAAGTTTCT
  TCTCTTTTGA CTATCGCCCT CAAATGACAA ACTGCTGCCA GTTGTCAGTG CTCAATAGCA
  AGCTGGGTCG CACGGTACCC TCTGCTCAAT AGTGTCTGCT GATGGTGGGA AAGTGGGTGA
  TCAGAACTTA CGACATTCTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45489251	mCV23906224	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31004374					SNP	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:115834966 () rs orientation: forward

Symbol	Name	Function Class
Rr583646	regulatory region 583646	332 bp distal