rs31005402 SNP Detail

Summary

• ID
  rs31005402
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:5740405 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTAGACAATA ATATGTGCAT GTATATCATA TATATATATG
  TATATATACT TTGCACATGT GGTTATAGGA TGATATGAGA AAAGAGAAGA CAAACTAACT
  R
  TAAAGTGATG TGGAGAACCG AATGTAGGTG ATGGACACAA GCTATCAAAG GATAAATAAA
  GACGATTGCC TTCCAAGCTC TGATTCTCTA TGGAACTTT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45987380	mCV23041260	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G
ss132939831	ENSMUSSNP1024750	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		G
ss321730172	CHEV_6_5690405	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31005402					SNP	A	A	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:5740405 () rs orientation: forward

Symbol	Name	Function Class
Dync1i1	dynein cytoplasmic 1 intermediate chain 1	Intron
Rr626170	regulatory region 626170	83 bp distal