rs31005736 SNP Detail

Summary

• ID
  rs31005736
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:136936383 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CTTGATGCC AACAACCTTT GAGACATCTT
  GTGGCCTTTT TTGTCTTTGT TTGtttattt gtttgagaca gggtttctct gtgtagccct
  ggaagttctg aaactcactc tatagaccag gctggcatca aactcaaaga aagatctgcc
  Y
  gcctctgcct tctgagtgct ggaattagag ttcaccactg cttgTTTTTA TTTTTATTTA
  tttattcatt ttgagacatg ctctcatttc atagccttgc tgggtttgta ggtgtgaaac
  ttgcaagatg gataaagctt actttgaact                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss44986835	mCV23233960	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C
ss145563666	ENSMUSSNP3270781	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		C
ss319997349	CHEV_1_138905222	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31005736					SNP	T	T	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:136936383 () rs orientation: forward

Symbol	Name	Function Class
Gm70790	predicted gene, 70790	within coordinates
Rr419562	regulatory region 419562	1623 bp proximal
Rr419563	regulatory region 419563	1729 bp proximal