rs31005822 SNP Detail

Summary

• ID
  rs31005822
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:98762985 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAAAT TAGGGGAAGG AGAAATGGCA
  R
  AAGGCTTAAG AATGCATCCT GTTCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45489994	mCV24575116	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A
ss135527798	ENSMUSSNP3240427	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		A
ss320845385	CHEV_3_98659592	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31005822					SNP	A	A	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:98762985 () rs orientation: forward

Symbol	Name	Function Class
Gm65690	predicted gene, 65690	within coordinates
Hsd3b1	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	within coordinates
Rr1170	regulatory region 1170	39 bp distal
Rr581744	regulatory region 581744	1588 bp distal
Rr581745	regulatory region 581745	within coordinates
Rr581746	regulatory region 581746	976 bp proximal
Tssr34711	transcription start site region 34711	397 bp downstream