rs31007941 SNP Detail

Summary

• ID
  rs31007941
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:7282152 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        CACAC ACACAGAGAG AGAGAGAGAG
  R
  GAGAGAGAGA GAGAGAGAGA GAGAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss46468193	mCV23566867	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss148198450	ENSMUSSNP4915241	ENSEMBL	ENSEMBL_Sanger	r	SNP	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs31007941					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:7282152 () rs orientation: reverse

Symbol	Name	Function Class
Cpgi18306	CpG island 18306	600 bp distal
Gm45844	predicted gene 45844	864 bp upstream
Rr642334	regulatory region 642334	967 bp distal
Rr642335	regulatory region 642335	374 bp distal
Rr642336	regulatory region 642336	892 bp distal
Rr642337	regulatory region 642337	631 bp distal
Tssr64464	transcription start site region 64464	1153 bp downstream
Tssr70610	transcription start site region 70610	1108 bp upstream
Tssr70611	transcription start site region 70611	1067 bp upstream