rs31010750 SNP Detail

Summary

• ID
  rs31010750
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:19296325 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TAGCACCGAC TCAAGCTTTT GCTCTGAAAA AAAACCGTGT
  CGAGGACGAC AGGAAGACCG GAACAAAGAA CAGTAAGCTC CGCGGAAAAA AGAAACGTGA
  S
  CGGCGAATCT GCAGAGCCAA ACTGCAGAAC ACAGAGGCGG GGCCTATGAA CGCTGTCTCC
  CGGAGCGCCG CGCATGCGCG AGTTCTAGCC GCCCCCTCC                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
ss45988243	mCV25052526	ABI	CRAMUS_MOUSE	f	SNP	G	G	C			C
ss48163330	NES11822851	PERLEGEN	MM_PANEL2	f	SNP			C	C	G		G	C		G	C	G	G
ss322117455	CHEV_7_20147749	CHEVERUD	SCREENING_POP	f	SNP									C					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
rs31010750					SNP	G	G	C	C	G	C	G	C	C	G	C	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48163330	NES11822851	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:19296325 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18499	CpG island 18499	within coordinates
Ppp1r37	protein phosphatase 1, regulatory subunit 37	within coordinates
Rr643188	regulatory region 643188	86 bp proximal
Rr643189	regulatory region 643189	666 bp proximal
Tssr70928	transcription start site region 70928	234 bp upstream
Tssr70929	transcription start site region 70929	203 bp upstream
Tssr70930	transcription start site region 70930	152 bp upstream
Tssr70931	transcription start site region 70931	within coordinates
Tssr70932	transcription start site region 70932	12 bp downstream