rs31022041 SNP Detail

Summary

• ID
  rs31022041
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:7665844 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTTTTCCCCT ATAATCTTTG AGAACTGATT TGTAGTTTGT
  ATAAATTCTT GGAACATCTC TTGTTTATTT TTGGATGCCA AAGCTGTTCT GACCAGGATA
  M
  AATGCCTAGG TTAGGTCCAT GCATCCTGGG TTTCACCTTG TGGTTGCTGG TTGCCAAGGT
  AGCAGAGCAG GCGTCACCTG TTGCTATGGT GCTGCTCTA                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss39245748	mCV24310286	ABI	CRAMUS_MOUSE	f	SNP	C	A			A		C
ss51189962	NES14316951	PERLEGEN	MM_PANEL2	f	SNP		A	A	A		C		A	C		A	C	A
ss139100818	ENSMUSSNP280705	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A					C			C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs31022041					SNP	C	A	A	A	A	C	C	A	C	C	A	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51189962	NES14316951	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:7665844 () rs orientation: forward

Symbol	Name	Function Class
Nek10	NIMA (never in mitosis gene a)- related kinase 10	within coordinates
Rr290587	regulatory region 290587	1044 bp distal
Tssr124320	transcription start site region 124320	214 bp upstream