rs31023302 SNP Detail

Summary

• ID
  rs31023302
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:102124982 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATAGGTACC AGCCAGTCCC
  TTTCCCTGAA CCCTGGACCC TACCTCCAGA AATCCAAGCG AAGTTTCTCT CTGTGCTCGA
  AAGGACACGC CCACCCAAAG AACAAAGCAG CGGCTGTAGA GTGTTAGTCC CTTCCTATCG
  ACAGAAGAAA GACGACATGT TGGCTCGCAA GATCCAGTCT TGGAAGCTGG GGACTGCTGT
  M
  CCTCCCATCA GTTTCAAGCC TGGCCCCTGC AGCGAGGCCG ACCTGCAGAA GTGGGAGGCC
  ATCTGGGAGG CCAGCAGGCT TAGGCACAGG AAGCGGCTGA TGGTTGAGAG GTCAGAGTGT
  GTTTCTGCAA GGAGTTGGCT TGTGATGGAT GCTCTTGTGT AACTTTCCTT ATTGGGGAAA
  AAAAAAAAGC CGCATCCATT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J
ss39246029	mCV22290639	ABI	CRAMUS_MOUSE	f	SNP	C	A	A
ss146740358	ENSMUSSNP3086327	ENSEMBL	ENSEMBL_Sanger	f	SNP		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J
rs31023302					SNP	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:102124982 () rs orientation: forward

Symbol	Name	Function Class
Gm52170	predicted gene, 52170	882 bp upstream
Lmo7	LIM domain only 7	within coordinates
Tssr126931	transcription start site region 126931	650 bp downstream
Tssr126932	transcription start site region 126932	66 bp downstream