rs31025369 SNP Detail

Summary

• ID
  rs31025369
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:80515964 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TAAAGTTTTC AATGTTTCAA TCTCTAAATC ATAGCTATTT
  GAAATTCTGA AATATAAACA TGAATAGAGA AAGGCTATTC AGGACATATT TTCTGATGAC
  Y
  CCTCCCAGTG TACTTCAGTT TTTCAGATAT GTTCTGATTG ATAGCACTCT GTTCCTTGGT
  TAATGATCAA ATACAACTTT CACACCATCT GTATCAGTA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46471554	mCV25212229	ABI	CRAMUS_MOUSE	f	SNP	C	T	C	T
ss134228561	ENSMUSSNP524502	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		T
ss325901779	CHEV_X_78717697	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31025369					SNP	C	T	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:80515964 () rs orientation: forward

Symbol	Name	Function Class
Rr7859	regulatory region 7859	257 bp proximal