rs31028367 SNP Detail

Summary

• ID
  rs31028367
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:11172885 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GGTGGGAGGT TTTATCCTGG ATCCTGGGTT ATACCACTGA AGAAAGTGAC ACCTCTCTCC
  TCAGCCACTA TTAACTGTTA ATAGTCCCTC AGGGTAGGGG TGAAGCCTCC AGAGCCCTTC
  CTCCCTCTAA TGAAAAAGTT GATGACTCTA GTGTTGGGTA GGTGACCACA TCTGTAGTGA
  GTTCATGAGT GCATCACCCA TGTTACATTC AGAGGACAAT GTTGCACAGC CCTTTCTACC
  ACTTCTGACT TTAAATCTTC CTACCCTCTC TTCTATAACG TTCATGGAGC CTTGGTGTGT
  R
  TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGCGCGCGTC CCAGAAAAAT GATTTAAAAC
  ATCTAAAACG TTTTTACTTT AAAATAATTG TGTATCTGCA TGTGTGTTTG GATGCCTATG
  AAAAAGGGTG TCAGGTCCCC TGAAGTTTAA GTTGGCACCG AGCTGCCTGA TAAGAGTGTT
  AGCAATTAAA CTCTGGTTCT CTGCAAAAAC AGCAAGATTC ATGACCACTG AACCAGCTCA
  CCAACCTCAA AAAAGATTTT TTAAAATAAA ATGAAGAGAA TGACATCTTC AGAGGACACA
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss44988214	mCV25122744	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G	G
ss146048781	ENSMUSSNP6124824	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31028367					SNP	G	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:11172885 () rs orientation: forward

Symbol	Name	Function Class
4930526L06Rik	RIKEN cDNA 4930526L06 gene	1296 bp upstream
Ms4a13	membrane-spanning 4-domains, subfamily A, member 13	within coordinates
Ms4ac	membrane-spanning 4-domains, subfamily A cluster	within coordinates
Tssr158299	transcription start site region 158299	1163 bp downstream
Tssr158300	transcription start site region 158300	1179 bp downstream