rs31028403 SNP Detail

Summary

• ID
  rs31028403
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:129406859 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAAAT TACAGGCTCT CTTGGAACTT
  Y
  CTAACAACCA GTTTATACAA TGTAT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45490525	mCV22329431	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C
ss135887095	ENSMUSSNP2674840	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		C
ss320962613	CHEV_3_129316128	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31028403					SNP	T	T	C	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:129406859 () rs orientation: forward

Symbol	Name	Function Class
Elovl6	ELOVL fatty acid elongase 6	within coordinates
Rr585045	regulatory region 585045	136 bp distal
Rr585046	regulatory region 585046	1047 bp proximal
Tssr31647	transcription start site region 31647	342 bp downstream
Tssr35617	transcription start site region 35617	684 bp downstream