rs31028912 SNP Detail

Summary

• ID
  rs31028912
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:4019520 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                              AACCAATATA CATCTAAGTA
  ATGAATCGAT TGTTAAAAAT GTATGGATTT AAGTTATTGA TTTGTGTTGT TTTTTGTTTG
  TTTGTCTGTT TATTTTTTAA TTAATGCAGT ACAATTTGTT CTAGTAGACT GCTCCTGGGA
  AGGAGGGTTG CCCTAAATGT TGCCCAGACT TTGCACCATT AAATAAAGCT CAGTTTTTCC
  W
  CTCCCAGCAG CAAGGGAATA TTAATAGGTA CTTTGCTTGG GTGTGACTTT GTACCATATT
  TTCACTTCCA TACTGGAATT TCATCTTGTT TGGGCTTACA CAGGTTTTGT GAATACTGTC
  ATAATCTCCA TATGTTGATG TAGGAGAAAG AGAAAGATAT TAGGAACATG ATGAAGAGAG
  AAATTGGATA GAGCCTTCAG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45490628	mCV23390215	ABI	CRAMUS_MOUSE	f	SNP	T	A	A	A
ss136174979	ENSMUSSNP682072	ENSEMBL	ENSEMBL_Sanger	r	SNP	A	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31028912					SNP	T	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:4019520 () rs orientation: reverse

Symbol	Name	Function Class
Rr382823	regulatory region 382823	264 bp upstream