rs31030609 SNP Detail

Summary

• ID
  rs31030609
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr14:70440503 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTTTCCATG TGGCACAGGG
  AACTTGCCCC ATCCCCTGCG TAAGGTTCTT AGAGCAGATC TTCCCAAGCA GACCCACCTG
  GATTCAAGGA ACCATCTCTC CTGGGTGGGG GGCAGCCATT GCACACAGTC CTGGGCGCAG
  GGTCATGAAA CTGGAAATTA AGGGTGTTGG AGCCACCATT CCGGATCACT GGCACCTGTG
  R
  GGAGGGGCCA GGAGCGGCAA GCTCAGGGCC CAGAGGCTCC ACAGGAGTTC CACTGGGAAG
  GAATGGCCTC CTGGGGAAGT TTCGGAGGCT CTTAGGAGCT TCCTTCAGAC TGTCTTCCCT
  CCTTATATTG TCGATCCACG GCTCCCCCCA CCTGGCCTGC TAGTGTCCCA TCAACTGCTG
  GCCCATCAGT GTCCTTTTTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39246112	mCV24337835	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G	G
ss139681777	ENSMUSSNP7233545	ENSEMBL	ENSEMBL_Sanger	f	SNP			G		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31030609					SNP	A	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:70440503 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Gm26908	predicted gene, 26908			365 bp upstream
Rr494880	regulatory region 494880			1055 bp proximal
Rr494881	regulatory region 494881			1559 bp proximal
Sorbs3	sorbin and SH3 domain containing 3			Intron
				Noncoding-Transcript-Variant
				Splice-Site
Tssr126403	transcription start site region 126403			340 bp upstream
Tssr129550	transcription start site region 129550			354 bp downstream
Tssr129551	transcription start site region 129551			401 bp downstream
Tssr129552	transcription start site region 129552			413 bp downstream