rs31031674 SNP Detail

Summary

• ID
  rs31031674
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:32979071 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATGCCCGAG GCTTGTAGGA
  TTCCTGGAGA TGCTGCCAGG GAATGATAAC CCAGAAGCCA CCTGATTCAT ATCAGCCGGC
  CAGGGAAGTG TTCCGAACCC TGGAGGTCCT CTTCCTTAAG GGAAGCGTGT GGGTCCATAG
  CCCACTCTAA TTGCTAAGTT CTGAATGTTG TGCCTTTCCA GAAAATGCCC ATGAAGACCC
  R
  GTGTTGTATA TGCCCAAGTG GGCCAAATAT ACTGAGGGTT TCCTAGGAGA GGTCACATTC
  ATGGCCTGTG AGTGAGCCAC AAAGAAACAT AATCAGATAG GTGATACAGC ACCTGCTGTG
  CCTGCCTCTC ACTCAGAGAG GGGGCTTCAG TGAGCTATGC CAAGGAAGGG CTCGCGTGAG
  CTATTCCTGA GATGGATAGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss39246454	mCV22706575	ABI	CRAMUS_MOUSE	f	SNP	G	A					A	A
ss62258295	NES17204589	PERLEGEN	MM_PANEL2	f	SNP		A	A	A	A	A		A	A	G	G	A	G	G
ss139248757	ENSMUSSNP1727884	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A						A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs31031674					SNP	G	A	A	A	A	A	A	A	A	G	G	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss62258295	NES17204589	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:32979071 () rs orientation: forward

Symbol	Name	Function Class
Arhgap22	Rho GTPase activating protein 22	within coordinates
D14Mit175	DNA segment, Chr 14, Massachusetts Institute of Technology 175	765 bp distal