rs31036699 SNP Detail

Summary

• ID
  rs31036699
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:9672686 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTGTTATGT TCCATTAAAA
  AAAATCTCTT GGGATACAGT GTCAGGATAT CTCTAAGGTG ATGAAAAAAA AGAAGATAAA
  TTATACCACA GTATATTCAG CATGTAACTT CTAAGAAGTT GTATGCAATG TACTATAAAA
  TTTGTGAGCA AAGCAATGTG TTAGAAATTT GAAAAAATTT GAATTTATTT GGAGATGTGA
  R
  AAATCTCTGC TAATGCTAAC AATCACACCC TAGATATTCC TAGTTTAAAG AACAGATTTC
  TTTCCTACAC TGGGCCTACT TGGATTACAG AGCATAACAT ATTAATCTTT CTGTCTCAAC
  TTGTATAATC ACCCCAGACA CATTTTGAGT GTGTATGAAC AACACTGCTC AGGGGGCACT
  CTGTCTTATT CAGTGTCACT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45491402	mCV23605680	ABI	CRAMUS_MOUSE	f	SNP	A	G	A	A
ss134576769	ENSMUSSNP3101059	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs31036699					SNP	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:9672686 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12974	CpG island 12974	968 bp proximal
Gm56803	predicted gene, 56803	1137 bp upstream
Rr78141	regulatory region 78141	114 bp proximal
Tssr28346	transcription start site region 28346	1177 bp upstream
Tssr28347	transcription start site region 28347	1200 bp upstream
Zfp704	zinc finger protein 704	within coordinates