rs31040434 SNP Detail

Summary

• ID
  rs31040434
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:84090147 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTCCCGAATC TTGAGCAGTT CACTTAACTG CAAAACTCTC
  AACCAACCGA CAGAAAACAA AGAGAAGCGA ATGATAGCCA ACCTCAGCAC ACAGGCCTTG
  M
  GGATCCTCAC TCAATTGATT TCTAATAGTT ACAAGTGTCC ACGCTGTGAG GGCTGTACCT
  TCTCCTTGAA GTAAACAATA TTTAAGTGAT GTCCAGCAT                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46472427	mCV22789620	ABI	CRAMUS_MOUSE	f	SNP	A	C	A
ss134233974	ENSMUSSNP3759031	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		A
ss325902973	CHEV_X_82291880	CHEVERUD	SCREENING_POP	f	SNP				A	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31040434					SNP	A	C	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:84090147 () rs orientation: forward

Symbol	Name	Function Class
Dmd	dystrophin, muscular dystrophy	within coordinates
Rr692261	regulatory region 692261	1399 bp proximal
Rr692262	regulatory region 692262	1883 bp proximal
Tssr161429	transcription start site region 161429	1743 bp upstream
Tssr161430	transcription start site region 161430	1768 bp upstream