rs31040886 SNP Detail

Summary

• ID
  rs31040886
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:51259885 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATCA AGTTAGAAAT CAAGATACTT
  W
  TAAAAAAACT TTTTAAAACA TTTTT                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J	LG/J	SM/J
ss45492287	mCV24462586	ABI	CRAMUS_MOUSE	f	SNP	A	T	T
ss135172808	ENSMUSSNP1196663	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T
ss320762360	CHEV_3_51156386	CHEVERUD	SCREENING_POP	f	SNP				T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J	LG/J	SM/J
rs31040886					SNP	A	T	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:51259885 () rs orientation: forward

Symbol	Name	Function Class
Rr576282	regulatory region 576282	907 bp proximal
Rr576283	regulatory region 576283	1089 bp proximal
Rr576284	regulatory region 576284	1748 bp proximal