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rs31048426 SNP Detail
Summary
  • ID
    rs31048426
  • Variation Type
    SNP
  • Alleles
    C/T
Genome Location and Flanking Sequence
  • Location
    Chr3:130728342 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                          GCAAACTGTG ATGAGCAAGA CAGTAAGCAG CATCCCTCCG
    TGGCCTCTGC TTCAGCTCCT GCCTCCTGGG TTCTTCCCTG TTTGAGTTCC CATCCTGACC
    Y
    CTTTCTATGA TGAACAGTGA CATGGAAGTG TAAGCCCAAG AAACACCTTC CTCCCTCAGT
    TGTTGTTGTT ATTGTTGTTT TGGTGTTTTG ATTTTGTTT                       
    
    Y = C/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
A/J
C57BL/6J
DBA/2J
ss45492583 mCV23363590 ABI CRAMUS_MOUSE f SNP C C T
ss135902517 ENSMUSSNP7117060 ENSEMBL ENSEMBL_Sanger f SNP C T
SNP Consensus Information
SNP Consensus Type
A/J
C57BL/6J
DBA/2J
rs31048426 SNP C C T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr3:130728342 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
2010110G14Rik RIKEN cDNA 2010110G14 gene within coordinates
Gm64594 predicted gene, 64594 within coordinates
Gm64601 predicted gene, 64601 164 bp downstream
Rr585239 regulatory region 585239 674 bp proximal
Rr585240 regulatory region 585240 1684 bp proximal
Tssr31681 transcription start site region 31681 1892 bp upstream

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory