rs31048645 SNP Detail

Summary

• ID
  rs31048645
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:181339237 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAACA GCATATGTCC TCCCTTCATA
  M
  CGAGGAGGGT AGAGAAAACA GACCT                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss44990702	mCV25243989	ABI	CRAMUS_MOUSE	f	SNP	A	C	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31048645					SNP	A	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:181339237 () rs orientation: forward

Symbol	Name	Function Class
Ccdc121rt1	coiled-coil domain containing 121, retrogene 1	221 bp upstream
Cpgi1136	CpG island 1136	808 bp distal
Rr424762	regulatory region 424762	78 bp distal
Rr424763	regulatory region 424763	167 bp distal
Rr424764	regulatory region 424764	769 bp proximal