rs31053590 SNP Detail

Summary

• ID
  rs31053590
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:33018149 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TATCT ATCTATCTAT CTATCTATCT
  R
  TCTGTCTGTC TGTCTGTCTG TCTGT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45494915	mCV23043018	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss45499249	mCV23043027	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss134753392	ENSMUSSNP2287734	ENSEMBL	ENSEMBL_Sanger	f	SNP		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31053590					SNP	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:33018149 () rs orientation: forward

Symbol	Name	Function Class
Gm37459	predicted gene, 37459	within coordinates
Pex5l	peroxisomal biogenesis factor 5-like	Intron
Rr575039	regulatory region 575039	1629 bp proximal
Rr575040	regulatory region 575040	1711 bp proximal