rs31054283 SNP Detail

Summary

• ID
  rs31054283
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:126219497 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTAGTTCTA CTAAGGAATC
  CCCGAAACTG AGAGAATCAG ACATTATATG CACGAGATGA AAACGGGGTG GAAAAGAGGG
  ACATTCTGCC CAGGGTCCTT CCTGATCTGA GATCTCCGAG GTTCTAAGAA TTGCTGTAAC
  AGTTCCTGGC ACAGAGGCTG TGCCAGAGAC AGGTGAGGCA GAGGGCTGTC AATCAAAGGT
  Y
  AAGAGTAAGT GGTGGCGTGT TCATCTCCTA AGAAGCAGGT GCTCAAGGGT CCAGCAGCTA
  GGACTGGCCA TTGACACTGA GGACGGGTGT TCTTGACCTT AATTTTCTGT CTGACGGAAG
  GAAGGTTGTT TTCGAACCCA TCCTTAGAAG ATCTACAATC TAGGGTTGCT CATTGCCCAG
  AACCCCGTGT TTCTTGGGCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45992636	mCV22749695	ABI	CRAMUS_MOUSE	f	SNP	C	T	T
ss145875038	ENSMUSSNP655753	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs31054283					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:126219497 () rs orientation: forward

Symbol	Name	Function Class
Gm39086	predicted gene, 39086	1844 bp upstream
Gm39087	predicted gene, 39087	1374 bp upstream
Rr655535	regulatory region 655535	466 bp distal
Rr655536	regulatory region 655536	1135 bp proximal
Rr655537	regulatory region 655537	1568 bp proximal