rs31061547 SNP Detail

Summary

• ID
  rs31061547
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:126072218 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGGA GGAGGACAAG GGAAGCCTGC
  R
  GGGAACAAAT AGGGAAGCAG CCAGA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss45994028	mCV23679452	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss145873616	ENSMUSSNP2938783	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		G
ss322450814	CHEV_7_133616560	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs31061547					SNP	A	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:126072218 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19695	CpG island 19695	160 bp distal
Cpgi19696	CpG island 19696	1434 bp proximal
Sh2b1	SH2B adaptor protein 1	within coordinates
Tssr74717	transcription start site region 74717	1557 bp upstream
Tssr74718	transcription start site region 74718	651 bp upstream
Tssr74719	transcription start site region 74719	609 bp upstream
Tssr74720	transcription start site region 74720	1888 bp downstream