rs31065132 SNP Detail

Summary

• ID
  rs31065132
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:145013077 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCATGTAGCA ATCTTGCACA
  TCTGACTCAT ACATCATAAG AAGATAATGT TTATCTTATC TTCAGGATAT GTAAGCAAGG
  TTCCATTTGG GAAGCATAGA CAATTTTTTA CAAGAAAATA AATATGCATT GTCCCTAATT
  GGACTTTTTA TCATTCACAT ATATGAGAAA GTAAATTTAT GTTTATTATA AACTACTATG
  K
  GATTCTATCA CAATACTTAA TCTGATTACT AGACTGTTTT TTATTCAATT ATTAACTTTA
  TAGTAATTTG TACTGAATTG TAGAATTAAT TTCTGTTTTA AAGATTGATT TCAATGTTTA
  ATCCTAACCA TTTGTACTTC TAAGTGTATT GTAGAAGTTG TTTGCTTGTT AAATGTTGAG
  TTGCCACTGA ACTTTAAGGT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49698968	NES12976123	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	T	G	G	G	G	G	G	G	T	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31065132					SNP	G	G	G	G	T	G	G	G	G	G	G	G	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49698968	NES12976123	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:145013077 () rs orientation: forward

Symbol	Name	Function Class
Rr420032	regulatory region 420032	1510 bp proximal