rs31066234 SNP Detail

Summary

• ID
  rs31066234
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:66314708 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGATTTTTC TAAACCTTGT
  TAATGTTGGC AAAAACAGGG CGCACGTATA AAATCTATTG AGCGAGCATG GATGAGAAAT
  ACCAAGGCAA CCTCTCGACA AGAAAAATAC TTGTGTGACT TCTAATTCGT AAGCAAATTG
  GCAGTTAATT ACCTGTGTTT CGTAGCCATT GCTTGTGACG GACCGGATTT TCTCTGGCAC
  Y
  GTGACTTGCA CGTGTAATTT CTCACGAGCT GCAAGGTGCA AAAGGCATTT CTCAGAGCCA
  CACCCCCCAC GCCCTGAGGA ACCTTCATCC TTATCCCATG AAGCATCATC AACCCGAAAC
  AGGATCTAAA ACTTTTGGAG AGTTGGAGGA GCCAAGCCTG GGATCACCCC ATCCCCCCAA
  TATCTCCTTC CTTAGGGTTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49199410	NES12493465	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31066234					SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49199410	NES12493465	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:66314708 () rs orientation: forward

Symbol	Name	Function Class
Adam2	a disintegrin and metallopeptidase domain 2	within coordinates
Rr290037	regulatory region 290037	1308 bp distal
Rr290038	regulatory region 290038	293 bp proximal
Rr297405	regulatory region 297405	292 bp proximal
Tssr129281	transcription start site region 129281	435 bp downstream
Tssr129282	transcription start site region 129282	482 bp downstream
Tssr129283	transcription start site region 129283	504 bp downstream
Tssr129284	transcription start site region 129284	525 bp downstream