rs31066238 SNP Detail

Summary

• ID
  rs31066238
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:66314565 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGCACCAAAG GACGTGGGGC TGAGAAATCC CGCATTATCA
  GCAGTGATTT TTCTAAACCT TGTTAATGTT GGCAAAAACA GGGCGCACGT ATAAAATCTA
  Y
  TGAGCGAGCA TGGATGAGAA ATACCAAGGC AACCTCTCGA CAAGAAAAAT ACTTGTGTGA
  CTTCTAATTC GTAAGCAAAT TGGCAGTTAA TTACCTGTGT                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49199414	NES12493461	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31066238					SNP	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49199414	NES12493461	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:66314565 () rs orientation: forward

Symbol	Name	Function Class
Adam2	a disintegrin and metallopeptidase domain 2	within coordinates
Rr290037	regulatory region 290037	1165 bp distal
Rr290038	regulatory region 290038	436 bp proximal
Rr297405	regulatory region 297405	435 bp proximal
Tssr129281	transcription start site region 129281	578 bp downstream
Tssr129282	transcription start site region 129282	625 bp downstream
Tssr129283	transcription start site region 129283	647 bp downstream
Tssr129284	transcription start site region 129284	668 bp downstream