rs31066240 SNP Detail

Summary

• ID
  rs31066240
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:66314486 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATAATCTTA AAGAGAAGCA
  AAGATGGTTT GAAAAGAATA ATCTTAATGA GGAACATATT ACAAAGTGGA AAACATAGTT
  CTATTAAATG GCAACCAATC ACCTCTCCTC CAAACACACA TGGCTAGGTG GTTGGGAAGA
  GATCCTTTGG TGGATCCGGT CAACTTGTGA GTGTTCAGAA GCACCAAAGG ACGTGGGGCT
  R
  AGAAATCCCG CATTATCAGC AGTGATTTTT CTAAACCTTG TTAATGTTGG CAAAAACAGG
  GCGCACGTAT AAAATCTATT GAGCGAGCAT GGATGAGAAA TACCAAGGCA ACCTCTCGAC
  AAGAAAAATA CTTGTGTGAC TTCTAATTCG TAAGCAAATT GGCAGTTAAT TACCTGTGTT
  TCGTAGCCAT TGCTTGTGAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49199416	NES12493459	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31066240					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49199416	NES12493459	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:66314486 () rs orientation: forward

Symbol	Name	Function Class
Adam2	a disintegrin and metallopeptidase domain 2	within coordinates
Rr290037	regulatory region 290037	1086 bp distal
Rr290038	regulatory region 290038	515 bp proximal
Rr297405	regulatory region 297405	514 bp proximal
Tssr129281	transcription start site region 129281	657 bp downstream
Tssr129282	transcription start site region 129282	704 bp downstream
Tssr129283	transcription start site region 129283	726 bp downstream
Tssr129284	transcription start site region 129284	747 bp downstream