rs31066242 SNP Detail

Summary

• ID
  rs31066242
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:66314442 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAACAAAAGC AAGCAAGCAA
  GCAAACAAAC AAAACGCTAA GGAAAATAAT CTTAAAGAGA AGCAAAGATG GTTTGAAAAG
  AATAATCTTA ATGAGGAACA TATTACAAAG TGGAAAACAT AGTTCTATTA AATGGCAACC
  AATCACCTCT CCTCCAAACA CACATGGCTA GGTGGTTGGG AAGAGATCCT TTGGTGGATC
  S
  GGTCAACTTG TGAGTGTTCA GAAGCACCAA AGGACGTGGG GCTGAGAAAT CCCGCATTAT
  CAGCAGTGAT TTTTCTAAAC CTTGTTAATG TTGGCAAAAA CAGGGCGCAC GTATAAAATC
  TATTGAGCGA GCATGGATGA GAAATACCAA GGCAACCTCT CGACAAGAAA AATACTTGTG
  TGACTTCTAA TTCGTAAGCA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49199418	NES12493457	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	G	C	C	C	G	C	C	G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31066242					SNP	C	C	C	C	C	C	G	C	C	C	G	C	C	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49199418	NES12493457	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:66314442 () rs orientation: forward

Symbol	Name	Function Class
Adam2	a disintegrin and metallopeptidase domain 2	within coordinates
Rr290037	regulatory region 290037	1042 bp distal
Rr290038	regulatory region 290038	559 bp proximal
Rr297405	regulatory region 297405	558 bp proximal
Tssr129281	transcription start site region 129281	701 bp downstream
Tssr129282	transcription start site region 129282	748 bp downstream
Tssr129283	transcription start site region 129283	770 bp downstream
Tssr129284	transcription start site region 129284	791 bp downstream