rs31066715 SNP Detail

Summary

• ID
  rs31066715
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:142451645 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTCAC TGGTCTTGAG CCTGCTCTCT
  R
  CAGCCCTGGA TTTGCCACGG CTCCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	MSM/Ms	WSB/EiJ
ss47014027	NES10851531	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	G	G	A	G		A
ss136017202	ENSMUSSNP4170331	ENSEMBL	ENSEMBL_Sanger	f	SNP		A					G			G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	MSM/Ms	WSB/EiJ
rs31066715					SNP	A	A	A	A	A	G	G	A	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47014027	NES10851531	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:142451645 () rs orientation: forward

Symbol	Name	Function Class
Gm15540	predicted gene 15540	within coordinates
Kyat3	kynurenine aminotransferase 3	mRNA-UTR
Rr398091	regulatory region 398091	1586 bp downstream
Rr586476	regulatory region 586476	1194 bp distal
Rr586477	regulatory region 586477	1695 bp distal
Rr586478	regulatory region 586478	693 bp distal
Rr586479	regulatory region 586479	1852 bp proximal