rs31066816 SNP Detail

Summary

• ID
  rs31066816
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:142369310 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGGCATCC TCAGATCGCT
  GTTCAGTTCT GCTTCGGGAT ATTTTTGGTC CACTAGAAGA AGACTTGAAG CAGGGTGTTT
  TTTACAAACC AACGGGTTGC TGTCTTTTCA GCCAGAAGAT ACAGGGGTTG AAGAGAAAGT
  ATGAGGAACC TGGGAAGGGC GCAGGTAACC AAGGTAACCA AGGTTCCGCA TGCCCTGGGA
  R
  GTTTCTTACC ATCAGGCTGC AGTGTCCCCA GGCATCACTG GGGAACGCCA GCTTATGCTG
  TTCGTGTATC ACATACCTGA AGGTCTTCAT ACTGGATATT TCCTGCTCAC CCATCAGAGA
  CAGTCACTCA CTTAACAGTC AGACAGTCAC TCGCTTAACA ACTGAGCTCA AACTGACCAC
  CTTAGCCACC AGTGGGACTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss47013349	NES10855242	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs31066816					SNP	A	A	A	A	A	A	G	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47013349	NES10855242	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:142369310 () rs orientation: forward

Symbol	Name	Function Class
Gbp2-ps	guanylate binding protein 2, pseudogene	41 bp downstream
Gm19166	predicted gene, 19166	895 bp downstream