rs31068194 SNP Detail

Summary

• ID
  rs31068194
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:66315766 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATAGGTGTCT GACTAACATT
  TAAGGAGACA AACCAGTGTA ACTACAACCC AGATCAGTCA CCGGACCATC AAACCTCCTG
  CTTGATTCCC TGGCAATTCT CACGATCACA GACTAGTTTT GTCTGCCTTG AGCTTTTCCC
  AGAGAGGCTG AAACACTGTA TTCCTTCACA TCTAGATCCC TGGGTGGGTT CCATTCTCGA
  M
  AGCAGATTCC CGTTGGTGCA TACGGCACAT TGAATACATC ACCATGTGTT TGGTATTGTC
  TATGAACATC CGTGTGTATG ATTTTGGTTC AATACTGAAT TTATTCCCAG GGGGAAGTTA
  CCAGATGGAA GAGTATGTCT TGTAAATAGT TCCGAATCCT TCAAGATTGT GCTCCTAATT
  TACATCCCAC CAGAAGTGAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss49199398	NES12493475	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	A	C	C	C	C	C	A
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs31068194					SNP	C	C	C	C	C	A	C	C	C	C	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49199398	NES12493475	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:66315766 () rs orientation: forward

Symbol	Name	Function Class
Adam2	a disintegrin and metallopeptidase domain 2	584 bp upstream
Rr290038	regulatory region 290038	566 bp distal
Rr297405	regulatory region 297405	365 bp distal
Tssr129281	transcription start site region 129281	577 bp upstream
Tssr129282	transcription start site region 129282	556 bp upstream
Tssr129283	transcription start site region 129283	543 bp upstream
Tssr129284	transcription start site region 129284	526 bp upstream