rs31068198 SNP Detail

Summary

• ID
  rs31068198
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:66315713 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAAACGTTT TAGTATCAAA
  CAGTACTTTG CATATATTTG GATAGTGTCA ATCATAGGTG TCTGACTAAC ATTTAAGGAG
  ACAAACCAGT GTAACTACAA CCCAGATCAG TCACCGGACC ATCAAACCTC CTGCTTGATT
  CCCTGGCAAT TCTCACGATC ACAGACTAGT TTTGTCTGCC TTGAGCTTTT CCCAGAGAGG
  S
  TGAAACACTG TATTCCTTCA CATCTAGATC CCTGGGTGGG TTCCATTCTC GACAGCAGAT
  TCCCGTTGGT GCATACGGCA CATTGAATAC ATCACCATGT GTTTGGTATT GTCTATGAAC
  ATCCGTGTGT ATGATTTTGG TTCAATACTG AATTTATTCC CAGGGGGAAG TTACCAGATG
  GAAGAGTATG TCTTGTAAAT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss49199402	NES12493473	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	G	C	C	G	C	C	G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs31068198					SNP	C	C	C	C	G	C	C	G	C	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49199402	NES12493473	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:66315713 () rs orientation: forward

Symbol	Name	Function Class
Adam2	a disintegrin and metallopeptidase domain 2	531 bp upstream
Rr290038	regulatory region 290038	513 bp distal
Rr297405	regulatory region 297405	312 bp distal
Tssr129281	transcription start site region 129281	524 bp upstream
Tssr129282	transcription start site region 129282	503 bp upstream
Tssr129283	transcription start site region 129283	490 bp upstream
Tssr129284	transcription start site region 129284	473 bp upstream