rs31068202 SNP Detail

Summary

• ID
  rs31068202
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:66315279 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAGACGGGT GGTTACTCAC
  TGCCTTCTGT TTGGGACTGG CTAAGGCCGC CAAGTTCACT CAGCCCACTC AGTAGAAGCA
  AGATGAGCCA CATGGCCTGG CCTCCTGGAC CCCGCCCCGG GGAATGGCAG TTGGCCCTCT
  ACAGGGCAGT TGGGGGCGCG AGGTGGGGGC TGTGGGCAGC GCAGCTGTGT GCCGGGAAGC
  R
  TTTGTGCTGC TCGGTGAAAG CTTTGAAACT GTGAAAGGTT TGAAGGACTT GCTGGGGTTT
  GAAATCTGAG ACCAAAGAAG GGAAAAGGGA GGACAGGCAG TTGAGGAAGC AAAACTCACT
  CCGGAGAATC AGAATTCATG AAAAAGCCGA GTAGCAGAAA GGTTCACATA CACGTACATA
  AACTTTTAAT TCTTTTTTGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49199406	NES12493470	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31068202					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49199406	NES12493470	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:66315279 () rs orientation: forward

Symbol	Name	Function Class
Adam2	a disintegrin and metallopeptidase domain 2	97 bp upstream
Rr290037	regulatory region 290037	1879 bp distal
Rr290038	regulatory region 290038	79 bp distal
Rr297405	regulatory region 297405	within coordinates
Tssr129281	transcription start site region 129281	90 bp upstream
Tssr129282	transcription start site region 129282	69 bp upstream
Tssr129283	transcription start site region 129283	56 bp upstream
Tssr129284	transcription start site region 129284	39 bp upstream