rs31070989 SNP Detail

Summary

• ID
  rs31070989
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:14442293 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTCATTTTA ATCTTTATGA
  TATCCTATCA CTATATGAAC TAGGTGCTAG GAAGTAAAGG AAAACCTAGG CTACCACGGC
  TTCAGTGAGA GAAGCTGGTT ATCCATCCCC ATAGCCTGAG TCCTGGAACC CGTGGCTAAC
  ACAGCAGTAT TGTGTCAACA GCTCAGCTCA GTGAAGGCAG GGCTTCCTCT CAGGAGTCCT
  Y
  TGGCCGTGTC CTCATTGCTC CTTACTTCAT AGTTGCTGTT GCTGTGTTTC TCAGAATCAT
  GTCTGTGCTC AAGGAAGAAA CCCACTGGAC CAACTTCTGT CAGAATGGAC AACCTTGTTC
  AGCGGTTCAG GATCCTGTTC TCTGCTTATT TGTACATAGT CACCTTGGTC TGAGCTAGTC
  ACCATTGCCA TTTACAGCTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ
ss49199859	NES12679696	PERLEGEN	MM_PANEL2	f	SNP	T	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ
rs31070989					SNP	T	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49199859	NES12679696	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:14442293 () rs orientation: forward

Symbol	Name	Function Class
Gm29992	predicted gene, 29992	within coordinates
Gm50095	predicted gene, 50095	456 bp downstream