rs31072526 SNP Detail

Summary

• ID
  rs31072526
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:9149376 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                    TTCA TTTACATTTC
  CAATGCTATC CCAAAAGTCC CCCACACCCT CCCCCACCCA CCCACTCCCA CTTCTCAGCC
  CTGGCGTTCC CCTGTATTGA GGCATATAAA GTTTGCACGA CCAATGGGCC TCTCTTTCCA
  CTGATGGCTG ACTAGGCCAT CTTCTGATAC ATATGCAGCT AGAGACACGA GCTCCGGGGG
  K
  TACTGGCTAG TTCATATTGT TGTTTCACCT ATAGAGTTGC AGCTGCCACC AGCTCCTTGG
  GTAATTTCTC TAGCTCAGTT TTACTATAAG TACAGTGTTG TGCCATGATA AATGTTACCT
  ATCCTATTAG ATTCTAAAAC CTAGAAACAT TTCATCATAT CAAGAAGAAA ACATGAACAC
  GTAGGCCTTG TCAGATTGTA AAAATCTAAG AGAAAGAGTT CCCATAAGAG GAGGATATAA
  CCAGGTGGGC TTGGTGGCCT GCCTACAATT CCAGTTGTGT GAGGCTAAGA CAGAATCTCC
                                                                   
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss46477364	mCV23012730	ABI	CRAMUS_MOUSE	f	SNP	G	T
ss134085414	ENSMUSSNP3643061	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs31072526					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:9149376 () rs orientation: forward

Symbol	Name	Function Class
H2al1m	H2A histone family member L1M	627 bp upstream
Xk	X-linked Kx blood group	within coordinates